Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEPIEVFKALSNESRLQILQWLKEPDRHFAPHEGIDMNTIGVCVSQITDKLKMTQSTASQYLTILLRAGLIKAERIGKYTYYKRDEEAIGKLADFLKTEI
1R1U Chain:A ((18-84))
----EIFKALGDYNRIRIMELLSVSE---------------ASVGHISHQLNLSQSNVSHQLKLLKSVHLVKAKRQGQSMIYSLDD--------------
General information:
TITO was launched using:
RESULT:
Template:
1R1U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -37895 for 433 contacts (-87.5/contact) +
2D Compatibility (PS) -7070 + (NN) 165 + (LL) 2292
1D Compatibility (HY) -5200 + (ID) 1150
Total energy: -48858.0 ( -112.84 by residue)
QMean score : 0.600
(partial model without unconserved sides chains):
PDB file :
Tito_1R1U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1R1U-query.scw
PDB file :
Tito_Scwrl_1R1U.pdb
: