Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKRNQKEWESVSKKGLMKPGGTSIVKAAGCMGCWASKSIAMTRVCALPHPAMRAI
2ZXY Chain:A ((3-21))
--------------------GKAIFQQKGCGSCHQANVD----------------
General information:
TITO was launched using:
RESULT:
Template:
2ZXY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -4330 for 63 contacts (-68.7/contact) +
2D Compatibility (PS) -1982 + (NN) 306 + (LL) 2704
1D Compatibility (HY) -400 + (ID) 250
Total energy: -3952.0 ( -62.73 by residue)
QMean score : -0.313
(partial model without unconserved sides chains):
PDB file :
Tito_2ZXY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ZXY-query.scw
PDB file :
Tito_Scwrl_2ZXY.pdb
: