Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNIICLKKSSKRLSTSQAVLVTDIADTGITAAAGADIIAATAAVRAKEDTTTVMAAVIVTNAGATAAVNPKKVLVPLLGQGFFYVTD
3HO8 Chain:A ((300-343))
-------------TITEMVTGIDIVKTQILVAAGADLFGEEINMPQQKDITTLGYAI------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3HO8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -6046 for 219 contacts (-27.6/contact) +
2D Compatibility (PS) -4102 + (NN) 4444 + (LL) 3176
1D Compatibility (HY) -2000 + (ID) 700
Total energy: -5228.0 ( -23.87 by residue)
QMean score : -0.125
(partial model without unconserved sides chains):
PDB file :
Tito_3HO8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3HO8-query.scw
PDB file :
Tito_Scwrl_3HO8.pdb
: