Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAYDSRFDEWVQKLKEESFQNNTFDRRKFIQGAGKIAGLSLGLTIAQSVGAFEVNAAPNFSSYPFTLGVASGDPLSDSVVLWTRLAPDPLNGGGMPKQAVPVKWEVAKDEHFRKIVRKGTEMAKPSLAHSVHVEADGLEPNKVYYYRFKTG-----HELSPVGKTKTLPAPGANVPQMTFAFASCQQYEHG------------YYTAYKHMAK--EKLDLVFHLGDYIYEYGPNEYVSKTGNVRTHNSAEIITLQDYRNRHAQYRSDANLKAAHAAFPWVVTWDDHEVENNYANKIPEKGQSVEAFVLRRAAAYQAYYEHMPLRISSLPNGPDMQLYRHFTYGNLASFNVLDTRQYRDDQANNDGNKPPSDESRNPNRTLLGKEQEQWLFNNLGSS---TAHWNVLAQQIFFA-KWNFGTSASPIYSMDSWDGYPAQRERVINFIKSKNLNNVVVLTGDVHASWASNLHVDFEKTS-------SKIFGAEFVGTSITSGGNGADKRADTDQILKEN-PHIQFFNDYRGYVRCTVTP-HQWKADYRVMPFVTEPGAAISTRASFVYQKDQTGLRKVSSTTIQGGVKQSDEVEEDRFFSHNKAHEKQMIKKRAKITN
3ZK4 Chain:A ((196-555))----------------------------------------------------------------------------------------------------------------------------PGYIHTSF--LKELWPNREYTYKLGHRLFNGTTIWSKEYHFKASPYPGQ-SSVQRVVIFGDMGKAEADGSNEYNNFQPGSLNTTKQIIQDLEDIDIVFHIGDLCYANGYI--------------------SQWDQFT------AQIEPIASTVPYMTASGNHERDWPGTGSFYGNLDSGGEC----GVPAQTMFF-VPAE-------NREKFWYSTDYGM-FRFCIAHTELDW----------------------RKGTEQYEFIEKCLASVDRQKQPWLIFLAHRVLGYSSAGF-----YVQEGSF-EEPMGREDLQHLWQKYKV--DIAMYGHVHNYERTCPIYQNVCTNKEKHNYKGNLNGTIHVVVGGGGASLAE--------FAPINTTWSIFKDHDFGFVKLTAFDHSNLLLEYRKSSD-------GQVYDSFTISRDYRD--------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3ZK4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1945 -154740 -79.56 -471.77
target 2D structure prediction score : 0.51
Monomeric hydrophicity matching model chain A : 0.64

3D Compatibility (PKB) : -79.56
2D Compatibility (Sec. Struct. Predict.) : 0.51
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.473

(partial model without unconserved sides chains):
PDB file : Tito_3ZK4.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3ZK4-query.scw
PDB file : Tito_Scwrl_3ZK4.pdb: