Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MSYGDSREKILSAATRLFQLQGYYGTGLNQIIKESGAPKGSLYYHFPGGKEQLAIEAVNEMKEYIRQKIADCMEACTDPAEGIQAFLKELSCQFSCTEDIEGLPVGLLAAETSLKSEPLREACHEAYKEWASVYEEKLRQTGCSESRAKEASTVVNAMIEGGILLSLTAKNSTPLLHISSCIPDLLKR 3PPB Chain:A ((11-110)) ------KQAILETALQLFVSQGFHGTSTATIAREAGVATGTLFHHFP-SKEQL----LEQLFLGVKQEFADAIQAS-------------VSSRGDLKQDAEQL---WFAALTWAMANPLKQAFFQLY-------------------------------------------------------------

General information: TITO was launched using: RESULT: Template: 3PPB.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 301 -42854 -142.37 -428.54 target 2D structure prediction score : 0.62 Monomeric hydrophicity matching model chain A : 0.67 3D Compatibility (PKB) : -142.37 2D Compatibility (Sec. Struct. Predict.) : 0.62 1D Compatibility (Hydrophobicity) : 0.67 QMean score : 0.557

(partial model without unconserved sides chains): PDB file : Tito_3PPB.pdb: (Unconserved sides chains are recalculated) : Sequence: align-3PPB-query.scw PDB file : Tito_Scwrl_3PPB.pdb: