Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMFAKRFKTSLLPLFAGFLLLFHLVLAGPAAASAETANKSNELTAPSIKSGTILHAWNWSFNTLKHNMKD-IHDAGYTAIQTSPINQ--VKEGNQGDKSMSNWYWLYQPTSYQIGNRYLGTEQEFKEMCAAAEEYGIKVIVDAVINHTT-----------SDYAAISNEVKSIPNWT---HGNTQIKNWSDRWDVTQNSLLGLYDWNTQNTQVQSYLKRFLDRALNDGADGFRFDAAKHIELPDDGSYGSQFWPNI------TNTSAEFQYGEI--LQDSASRDAAYANYMDVTASNYGHSIRSALKNRNLGVSNISHYASD---VSADKLVTWVESHDTYANDDEES-TWMSDDDIRLGWA-VIASRSGSTPLFFS---------RPEGGGNGVRFPGKSQIGDRGSALFED---QAITAVNRFHNVMAGQPEELSNPNGNNQIFMNQRGSHG-VVLANAGSSSVSINTATKLPDGRYDNKAGAGSFQVNDGKLT-GTINARSVAVLYPDDIAKAPHVFLENYKTGVTHSFNDQLTITLRADANTTKAVYQINNGPETAFKDGDQFTIGKGDPFGKTYTIMLKGTNSDGVTRTEKYSFVKRDPASAKTIGYQNPNHWSQVNAYIYKHDGSRVIELTGSWPGKPMTKNADGIYTLTLPADTDTTNAKVIFNNGSAQVPGQNQPGFDYVLNGLYNDSGLSGSLPH
1CLV Chain:A ((12-444))--------------------------------------------------SIVHLFEWKWNDIADECERFLQPQGFGGVQISPPNEYLVADGRP-------WWERYQPVSYIINTRS-GDESAFTDMTRRCNDAGVRIYVDAVINHMTGMNGVGTSGSSADHDGMN--YPAVPYGSGDFHSPCEVNNYQDADNVRNCELVGLRDLNQGSDYVRGVLIDYMNHMIDLGVAGFRVDAAKHMS-PGDLSVIFSGLKNLNTDYGFADGARPFIYQEVIDLGGEAISKNEYTGFGCVLEFQFGVSLGNAFQGGNQ-LKNLANWGPEWGLLEGLDAVVFVDNHDNQRTGGSQILTYKNPKPYKMAIAFMLAHPYGTTRIMSSFDFTDNDQGPPQDGSGNLISPGINDDNTCSNGYVCEHRWRQVYGMVGFRNAVEGTQVENWWSNDDNQIAFS-RGSQGFVAFTNGGDLNQNLNTG--LPAGTY--------CDVISGELSGGSCTGKSVTV-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1CLV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2000 -115312 -57.66 -296.43
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain A : 0.66

3D Compatibility (PKB) : -57.66
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.393

(partial model without unconserved sides chains):
PDB file : Tito_1CLV.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1CLV-query.scw
PDB file : Tito_Scwrl_1CLV.pdb: