Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKISFSESQKLFAYFSGLIAALSLFIYYVSAQQSEGALILCITFGVIAAGIWFGPIYALAVTLIVLFVLGTLMMFFQTGQTSLFPAEEGLRMLVVWGIALLLFSFISGRIHDITAELRRSMTRLQSEIKSYVAVDRVTGFDNKQRMKLELSEEIKRAERYGNSFVFLLLHMHYFKEFKSLYGEKETDRLFQYVGQQIRTSV-RETDKKFRPSDERIGIVLTHTPAEHMPAVLTKLKKQLDTYQLEN-----GKYVSLTFHVCYL-------PYRNDIQTADQFLEELENEMMMNEL
3I5B Chain:A ((6-160))--------------------------------------------------------------------------------------------------------------------------------------DGLTGLSNRRHFDEYLEMEWRRSLREQSQLSLLMIDVDYFKSYNDTFGHVAGDEALRQVAGAIREGCSRSSDLAARYGGEEFAMVLPGTSPGGARLLAEKVRRTVESLQISHDQPRPGSHLTVSIGVSTLVPGGGGQTFRVLIEMADQALYQAKN-------


General information:
TITO was launched using:
RESULT:

Template: 3I5B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 690 -89383 -129.54 -629.45
target 2D structure prediction score : 0.72
Monomeric hydrophicity matching model chain A : 0.57

3D Compatibility (PKB) : -129.54
2D Compatibility (Sec. Struct. Predict.) : 0.72
1D Compatibility (Hydrophobicity) : 0.57
QMean score : 0.597

(partial model without unconserved sides chains):
PDB file : Tito_3I5B.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3I5B-query.scw
PDB file : Tito_Scwrl_3I5B.pdb: