Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSAGKSYRKKMKQRRMNMKISKYALGILMLSLVFVLSACGNNNSTKESTHDNHSDSSTHEEM----DHSGSADVPEGLQESKNPKYKVGSQVIINTSHMKGMKGAEATVTGAYD------TTAYVVSYTPTNGGQRVDHHKWVIQEEIKDAGDKTLQPGDQVILEASHMKGMKGATAEIDSAEKTTVYMVDYTSTTSGEKVKNHKWVTEDELSAK
3M5I Chain:A ((104-223))------------------QILRRSGGIGKESMGFTYSGIRTNGATSACTR---SGSSFYAEMKWLLSNSDNAAFPQMTKAYRNPRNK--PALIIWGVHHSESVSEQTKLYGSGNKLITVRSSKYQQSFTPNPGARRIDFH-WLL-----------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3M5I.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 263 -3843 -14.61 -34.94
target 2D structure prediction score : 0.45
Monomeric hydrophicity matching model chain A : 0.66

3D Compatibility (PKB) : -14.61
2D Compatibility (Sec. Struct. Predict.) : 0.45
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.205

(partial model without unconserved sides chains):
PDB file : Tito_3M5I.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3M5I-query.scw
PDB file : Tito_Scwrl_3M5I.pdb: