Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEISKQTSDLLLSLEKKKGTLPKFSVLRSIPRNRIIYG--APGTGKSNYLE-REVGKIFGDN---PYVFTRVTFFPGYTYGQFIGAYKPVPIYKKLSG-EEEIFSSNF-RDKMENFEPMIDYQF-VPGPFIDVLIKALKNRYTNFIL-I-IEEINRANAA-SVFGDIFQLLDRNKNGESDYPVTF--GPDIMNYLARNGIKDEMIKLPSNFFIWATMNNADQGVLPLDTAFKRRWSFEYLELEKYRKAVDSWKLSLRYKGHNKVIMWNDFRDIINKRLKGKVPEDKLLGPFFLKESELWNQNVFKNKLLYYLKEDVFKHNPTIDFLNASTFSELIEKYDGSDNIFTFDIDDSSFVSD
3B85 Chain:A ((4-208))--------------VIRPKTLGQKHYVDAIDTNTIVFGLGPAGSGKT-YLAMAKAVQALQSKQVSRIILTRPAVEAGEKLGFLPGDPYLRPLHDALRDMVEPEVIPKLMEAGIVEVAPL---AYMRGRTLNDAFVILDEAQNTTPAQMKMFLTRLGFGSKMVVTGDGLRLVRHILRGVDDVHFSELTSSDVVRHQLVGHIVDAYE--------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3B85.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 693 -45811 -66.11 -264.80
target 2D structure prediction score : 0.48
Monomeric hydrophicity matching model chain A : 0.57

3D Compatibility (PKB) : -66.11
2D Compatibility (Sec. Struct. Predict.) : 0.48
1D Compatibility (Hydrophobicity) : 0.57
QMean score : 0.149

(partial model without unconserved sides chains):
PDB file : Tito_3B85.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3B85-query.scw
PDB file : Tito_Scwrl_3B85.pdb: