Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIISYKCPNCGSDMAFDSETGSLSCSSCGRQDNIESLPKENIAARFSDDEAKEYQCKNCGAVLITEAETTATTCSFCGGAAILADRLSGHLAPAKVIPFTISKQEAEQAFRKWCKKGLLTPRGFMSADRIKSITGMYIPFWMFDLNSEVQVRANCTRVHQYEEGDYICTETEHFEAFRDINLDYLKIPVDASEKMKDELMDKLEPYSYEELKDFQTAYLAGYIAEKYNYTDEELFPRAKEKISSYIDSYIHSTFSGYTSVNVRDKHIHTKNVNSFYVLLPVWMVSYDYERAEHIFAMNGQTGKVVGKPPISRGKVAAWFSGIAGGTFLALKLVSLMMGGGF
3V5X Chain:A ((101-159))--------------------------------------------------------------------------------------------------------------------------------------------------------------NEYEQLNYAKQLKERLEAFTRDFLPHMK---EEEEVFQPMLM---EYFTYEELKDIKKKVIAQHC----------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3V5X.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 28 -4027 -143.80 -68.25
target 2D structure prediction score : 0.51
Monomeric hydrophicity matching model chain A : 0.53

3D Compatibility (PKB) : -143.80
2D Compatibility (Sec. Struct. Predict.) : 0.51
1D Compatibility (Hydrophobicity) : 0.53
QMean score : 0.353

(partial model without unconserved sides chains):
PDB file : Tito_3V5X.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3V5X-query.scw
PDB file : Tito_Scwrl_3V5X.pdb: