Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKTTVTDALYAGCEAVVKIAWLNGLWLLFTLLGGVLFGWAPSTAAMCAVIRKWLMGQKDVPIFSLFLDTYKKEFLKVNAIGLAFSALLLILSANYHYFSASTNWLSFAVTSCTLLAGLLYIIALMYVFPLYVHYQLPLRKYIPQALLFGAMRPLTTGCMLIGCGFVLYLLYTLPGLIPFYGPCLFGLVLMFFALRGFQKTEAQHHQAG
2JQ3 Chain:A ((39-62))-------------------------------------------------ARGWVTDG--FSSLKDYWSTVKDKFS-------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2JQ3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 16 -1525 -95.28 -63.52
target 2D structure prediction score : 0.67
Monomeric hydrophicity matching model chain A : 0.38

3D Compatibility (PKB) : -95.28
2D Compatibility (Sec. Struct. Predict.) : 0.67
1D Compatibility (Hydrophobicity) : 0.38
QMean score : 0.458

(partial model without unconserved sides chains):
PDB file : Tito_2JQ3.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2JQ3-query.scw
PDB file : Tito_Scwrl_2JQ3.pdb: