Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKIAVIGLGNMGQPIARNVLQAGYELTVYNRTKQKTEDLVTEGAQAADTPRLAAKSADIVITMLADDDSVSTVTFGEDGLLEGLAENGIHISMSTISVEFSEKLAAAHAEKGQFFLAAPVLGRPDAAAKAALRIITAGPAEAKQAAKPLLDSLSQQIFDVGEESKTANAAKISINFLLVSM-LEALSESFLMMEKYGLEQKQFLEIAS-ALFGSPVYQNYGTIMAEQKFEPAGFKMSLGLKDTNLALAAAKRVSANLPLAELAKSHFESGIEKGFGDLDWAALIKCIK
3W6Z Chain:A ((21-300))MRVGFIGLGIMGGPMATHLLKAGFLAAVYNRTREKTKPFAEAGVYVAESPADLAKRVDVVIVMVSDAPDVEQVLFGPSGVVEGARPGLIVVDMSTNSPDWARKFAERLAQYGIEFLDAPVTGGQKGAIEGTLTIMVGGKEELFHRLLPIFKAMGRDIVYMGPVGY--GQAMMLVNQVVVALNTVAMVEGLKLAKALGLDMDKVAEVLTRGAARSGAIELYLPKLLKGDLSP-GFKAEHLKKDLGYVLEEARKRGVKLPGAELAYELYRKMVEDGAGSLGIHAL-----


General information:
TITO was launched using:
RESULT:

Template: 3W6Z.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1567 -203038 -129.57 -730.35
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain A : 0.76

3D Compatibility (PKB) : -129.57
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.76
QMean score : 0.595

(partial model without unconserved sides chains):
PDB file : Tito_3W6Z.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3W6Z-query.scw
PDB file : Tito_Scwrl_3W6Z.pdb: