Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMETFKSILHEAQRIVVLTGAGMSTESGIPDFRSAGGIWTEDASRMEAMSLDYFLSYPRLFWPKFKE-LFQMKMSGSFEPNEGHLLLAELEKQGKQVDIFTQNIDGLHKKAGSRHVYELHGSIQTAACPACGARYDLPHLLER----EVPECTAAGNNGDICGTVLKTDVVLFGDAVMHFDTLYEKL---DQADLLLVIGTSLEVAPARFVPEDASLIPGMKKVIINLEPTYCDSLFDMVIHQKIGEFARSLGMKK
2H4J Chain:A ((3-239))MKEFLDLLNESRLTVTLTGAGISTPSGIPDF----------SQNV--FDIDFFYSHPEEFYRFAKEGIFPMLQA---KPNLAHVLLAKLEEKGLIEAVITQNIDRLHQRAGSKKVIELHGNVEEYYCVRCEKKYTVEDVIKKLESSDVPLC-------DDCNSLIRPNIVFFGENLPQ-DALREAIGLSSRASLMIVLGSSLVVYPAAELPL-ITVRSGGKLVIVNLGETPFDDIATLKYNMDVVEFARRV----


General information:
TITO was launched using:
RESULT:

Template: 2H4J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1190 -153176 -128.72 -699.43
target 2D structure prediction score : 0.66
Monomeric hydrophicity matching model chain A : 0.77

3D Compatibility (PKB) : -128.72
2D Compatibility (Sec. Struct. Predict.) : 0.66
1D Compatibility (Hydrophobicity) : 0.77
QMean score : 0.548

(partial model without unconserved sides chains):
PDB file : Tito_2H4J.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2H4J-query.scw
PDB file : Tito_Scwrl_2H4J.pdb: