Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMLFKKDRKQETAYFSDSNGQQKNRIQLTNKHADVKKQLKMVRLGDAELYVLEQLQPLIQENIVNIVDAFYKNLDHESSLMDIINDHSSVDRLKQTLKRHIQEMFAGVIDDEFIEKRNRIASIHLRIGLLPKWYMGAFQELLLSMIDIYEASITNQQELLKAIKATTKILNLEQQLVLEAFQSEYNQTRDEQEEKKNLLHQKIQETSGSIANLFSETSRSVQELVDKSEGISQASK---------AGTVTSSTVEEKSIGG--KKELEVQQKQMNKIDTSLVQIEKEMVKLDEIAQQIEKIFGIVTGIAEQTNLLSLNASIESARAGEHGKGFAVVANEVRKLSEDTKKTVSTVSELVNNTNTQINIVSKHIKDVNELVSESKEKMTQINRLFDEIVHSMKISKEQSGKIDVDLQAFLGGLQEVSRAVSHVAASVDSLVILTEE
3JA6 Chain:G ((270-463))------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SASVQETTAGSEEISSATKNIADSAQQAASFADQSTQLAKEAGDALKKVIEVTRM----ISNSAKDVERVVESFQKGAEEITSFVETINAIAEQTNLLALNAAIEAARAGEAGRGFAVVADEIRKLAEESQQASENVRRVVNE-------IRSIAEDAGKVSSEITARVEEGTKLADE--------------ADEKLNSIVGAVERINEMLQNIAAAIE--------


General information:
TITO was launched using:
RESULT:

Template: 3JA6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain G - contact count / total energy / energy per contact / energy per residue : 308 -18923 -61.44 -103.40
target 2D structure prediction score : 0.78
Monomeric hydrophicity matching model chain G : 0.66

3D Compatibility (PKB) : -61.44
2D Compatibility (Sec. Struct. Predict.) : 0.78
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.427

(partial model without unconserved sides chains):
PDB file : Tito_3JA6.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3JA6-query.scw
PDB file : Tito_Scwrl_3JA6.pdb: