Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKIGIVGATGYGGTELVRILSHHPHAEECIL---YSSSGEGNVYSEGYPHLTGLADQQLKPI-DMNTIKHEIDIMFLAAPPGVSSELTPKLADAGITVIDLSGDLRIKEPAEYEKWYKRTAAPKAVIQEAVYGLAELNQLQIQQAKLIANPGCFPTAVLLGLAPLAQKKLLD-ESFVIVDAKTGVSGAGRKASMGTHFSELNDNFKIYKVNEHQHTPEIEQALNEWQPGLGPITFSAHLVPMTRGIMATMYTRLTCDLTADDLHDLYSEFYQDSYFVRVRPKGQYPQTKEVYGSNFCDIAVTLDERTNRVTIVSVIDNLMKGAAGQAVQNFNLMNGWNEETGLTITPIYP
3DR3 Chain:A ((9-336))----IVGASGYAGAELVTYVNRHPHMNITALTVSAQSNDAGKLISDLHPQLKGIVELPLQPMSDISEFSPGVDVVFLATAHEVSHDLAPQFLEAGCVVFDLSGAFRVNDATFYEKYYGFTHQYPELLEQAAYGLAEWCGNKLKEANLIAVPGCYPTAAQLALKPLIDADLLDLNQWPVINATSGVSGAGRKAAISNSFCEV--SLQPYGVFTHRHQPEIATHLG------ADVIFTPHLGNFPRGILETITCRLKSGVTQAQVAQALQQAYAHKPLVRLYDKG-VPALKNVVGLPFCDIGFAV--QGEHLIIVATEDNLLKGAAAQAVQCANIRFGYAETQSL-------


General information:
TITO was launched using:
RESULT:

Template: 3DR3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1893 -227581 -120.22 -704.59
target 2D structure prediction score : 0.52
Monomeric hydrophicity matching model chain A : 0.81

3D Compatibility (PKB) : -120.22
2D Compatibility (Sec. Struct. Predict.) : 0.52
1D Compatibility (Hydrophobicity) : 0.81
QMean score : 0.370

(partial model without unconserved sides chains):
PDB file : Tito_3DR3.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3DR3-query.scw
PDB file : Tito_Scwrl_3DR3.pdb: