Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKTMSAITAAAAVTSCFTGFGAASFSAPAKAAAQTNTLSENTNQSAAELVKNLYNTAYKGEMPQQAQGLTINKSTKGDVHAAFGEPERPVGGDNRFDLYHWNMGQ-----PGYGFSYHKD---MTISEIRYFG------TGVER---QLNLGGVTPEVLQKQLGPVNRVLTVPFTDEIDYVYDTGRYELHFVIGTDQTADHVNLKAK
3N4I Chain:B ((12-111))---------------------------------------------------------------------IQFGM-TRQQVLDIAGAENCE-TGGSFGDSIHCRGHAAGDYYAYATFGFTSAAADAKVDSKSQEKLLAPSAPTLTLAKFNQVTVGMTRAQVLATVGQGSCTT-------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3N4I.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 262 -23050 -87.98 -277.71
target 2D structure prediction score : 0.57
Monomeric hydrophicity matching model chain B : 0.55

3D Compatibility (PKB) : -87.98
2D Compatibility (Sec. Struct. Predict.) : 0.57
1D Compatibility (Hydrophobicity) : 0.55
QMean score : 0.327

(partial model without unconserved sides chains):
PDB file : Tito_3N4I.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3N4I-query.scw
PDB file : Tito_Scwrl_3N4I.pdb: