Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIQLSNVRKSYQIGKETFDVLHSIDLDIHQGEYVSIMGPSGSGKSTIMNIIGCLDRPTSGTYQLDGEDISSYKDKELAAVRNRSIGFVFQQFQLLPRLNAKKNVELPMIYSGIGKKERQERAERALEKVGLADRMLHMPNELSGGQKQRVAIARAIVNEPKLILADEPTGALDTKTSEAIMDQFTALNAE-GTTIVLVTHEPEV----ADCTNRIVMVRDGNIVPASSGQRSVGE
3DHW Chain:C ((1-220))MIKLSNITKVFHQGTRTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTEGSVLVDGQELTTLSESELTKAR-RQIGMIFQHFNLLSSRTVFGNVALPLELDNTPKDEVKRRVTELLSLVGLGDKHDSYPSNLSGGQKQRVAIARALASNPKVLLCDEATSALDPATTRSILELLKDINRRLGLTILLITHEMDVVKRICDC---VAVISNGELI-----------


General information:
TITO was launched using:
RESULT:

Template: 3DHW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 1089 -144877 -133.04 -673.84
target 2D structure prediction score : 0.53
Monomeric hydrophicity matching model chain C : 0.84

3D Compatibility (PKB) : -133.04
2D Compatibility (Sec. Struct. Predict.) : 0.53
1D Compatibility (Hydrophobicity) : 0.84
QMean score : 0.512

(partial model without unconserved sides chains):
PDB file : Tito_3DHW.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3DHW-query.scw
PDB file : Tito_Scwrl_3DHW.pdb: