Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKEFAVIGLGRFGGSICKALSEEGVEVMAMDIDEDKVNEYAKIASHAVIGDSTDESVLKNLGLRNFDHVIVAIGENIQASILTTLILKELGVHTITVKAQNDYHEKVLSKIGADHIVHPERDMAKRIAHNIVSNNVLDYLELSEEHSLVEIVANSRLAGNTLLDLDIRAKYGINIVAIKRGKEVIVSPLATEVIHQEDILIVIGSVTDISRFEKRVLHTK
2HMT Chain:A ((7-144))--KQFAVIGLGRFGGSIVKELHRMGHEVLAVDINEEKVNAYASYATHAVIANATEENELLSLGIRNFEYVIVAIGANIQASTLTTLLLKELDIPNIWVKAQNYYHHKVLEKIGADRIIHPEKDMGVKIAQSLSDENVLNY---------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2HMT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 642 -107988 -168.21 -782.52
target 2D structure prediction score : 0.72
Monomeric hydrophicity matching model chain A : 0.74

3D Compatibility (PKB) : -168.21
2D Compatibility (Sec. Struct. Predict.) : 0.72
1D Compatibility (Hydrophobicity) : 0.74
QMean score : 0.689

(partial model without unconserved sides chains):
PDB file : Tito_2HMT.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2HMT-query.scw
PDB file : Tito_Scwrl_2HMT.pdb: