Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLKKWLAGILLIMLVGYTGWNLYQTYSKKEVGIQEGQQAPDFSLKTLSGEKSSLQDAKGKKVLLNFWATWCKPCRQEMPAMEKLQKEYADK-LAVVAVNFTSAEKSEKQVRAFADTYDLTFPILIDK-KGINADYNVMSYPTTYILDEKGVIQDIHVGTMTKKEMEQKLDLD
2H1B Chain:A ((2-135))----------------------------------EGSDAPNFVLEDTNGKRIELSDLKGKGVFLNFWGTWCEPCKKQFPYMANQYKHFKSQGVEIVAVN---VGESKIAVHNFMKSYGVNFPVVLDTDRQVLDAYDVSPLPTTFLINPEGKVVKVVTGTMTESMIHDYMNL-


General information:
TITO was launched using:
RESULT:

Template: 2H1B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 638 -20738 -32.50 -157.10
target 2D structure prediction score : 0.73
Monomeric hydrophicity matching model chain A : 0.72

3D Compatibility (PKB) : -32.50
2D Compatibility (Sec. Struct. Predict.) : 0.73
1D Compatibility (Hydrophobicity) : 0.72
QMean score : 0.654

(partial model without unconserved sides chains):
PDB file : Tito_2H1B.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2H1B-query.scw
PDB file : Tito_Scwrl_2H1B.pdb: