Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKEEKRSSTGFLVKQRAFLKLYMITMTEQERLYGLKLLEVLRSEFKEIGFKPNHTEVYRSLHELLDDGILKQIKVKKEGAKLQEVVLYQFKDYEAAKLYKKQLKVELDRCKKLIEKALSDNF
2EFW Chain:A ((8-122))-------STGFLVKQRAFLKLYMITMTEQERLYGLKLLEVLRSEFKEIGFKPNHTEVYRSLHELLDDGILKQIKVKKEGAKLQEVVLYQFKDYEAAKLYKKQLKVELDRSKKLIEKALSDNF


General information:
TITO was launched using:
RESULT:

Template: 2EFW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 343 -45813 -133.57 -398.37
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain A : 0.99

3D Compatibility (PKB) : -133.57
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.99
QMean score : 0.678

(partial model without unconserved sides chains):
PDB file : Tito_2EFW.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2EFW-query.scw
PDB file : Tito_Scwrl_2EFW.pdb: