Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTETTENVVITIPDKTSFTFHEAATSPSEGEEFVVGHFRELTVKISGSSTSREIKFYAVDENGEKTALS-------GTNKTDFQLGSSTLNTNEYWDFDIAGLFKVMFEVVSVTGDVTVKGIVVS
1LMI Chain:A ((57-112))--------------------------------------------IRGSVTPAVSQFNARTADGINYRVLWQAAGPDTISGATIPQGEQSTGK---IYFDVTGP----------------------


General information:
TITO was launched using:
RESULT:

Template: 1LMI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 117 3222 27.53 65.74
target 2D structure prediction score : 0.45
Monomeric hydrophicity matching model chain A : 0.55

3D Compatibility (PKB) : 27.53
2D Compatibility (Sec. Struct. Predict.) : 0.45
1D Compatibility (Hydrophobicity) : 0.55
QMean score : 0.323

(partial model without unconserved sides chains):
PDB file : Tito_1LMI.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1LMI-query.scw
PDB file : Tito_Scwrl_1LMI.pdb: