Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMPTEIYVDGASAGNPGPSGIGIFIKHEGKAESFSIPIGVHTNQEAEFLALIEGMKLCATRGYQSVSFRTDSDIVERATELEMVKNITFQPF----------VEEIIRLKAAFPLFFIK--WIPGK----QNQKADLLAKEAIRLNEKN
3AA3 Chain:A ((6-140))---EIFTDGSCLGNPGPGGYGAILRYRGREKTFSAGYTRTTNNRMELMALI--VALEALKEHCEVILSTDSQYVRQGI-TQWIHNWKKRGWKTADKKPVKNVDLWQRLDAALGQHQIKWEWVKGHAGHPENERCDELARAA-------


General information:
TITO was launched using:
RESULT:

Template: 3AA3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 510 -31884 -62.52 -267.93
target 2D structure prediction score : 0.57
Monomeric hydrophicity matching model chain A : 0.80

3D Compatibility (PKB) : -62.52
2D Compatibility (Sec. Struct. Predict.) : 0.57
1D Compatibility (Hydrophobicity) : 0.80
QMean score : 0.421

(partial model without unconserved sides chains):
PDB file : Tito_3AA3.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3AA3-query.scw
PDB file : Tito_Scwrl_3AA3.pdb: