Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKTLHVQTASSSYPVFIGQGIRKKACELLTSLNRPLT---RIMFVTDEEVDRLYGDEMLHLLQE-KWPVKKVTVPSGEQAKSMDMYTKLQSEAIRFHMDRSSCIIAFGGGVVGDLAGFVAATFMRGIDFIQMPTTLLAH-DSAVGGKVAVNHPLGKNLIGAFYQPKAVLYDTDFLRSLPEKELRSGMAEVIKHAFIYDRAF---LEELLNIHSLRDITNDQLNDMIFKGISIKASVVQQDEKEEGIRAYLNFGHTLGHAVEAEYGYGQITHGDAVALGMQFALYISEKT--VGCEMDRKRLVSWLKSLGYPSQIRKETETSVLLNRMMNDKKTRGGKIQFIVLNELGKVADHTFSRNELESWLNKWRLEETS
5EKS Chain:A ((9-346))MQTLHVELGERRYPIFIGSQLDPK------QLLEPYIHGQQVMIVSNVTVAPLYLSHYQEALESLGKTVATCILPDGEKYKDIQHLNLIFDALLEAGFNRDCTVLALGGGVIGDMAGFASACFQRGVYFVQVPTTLLSQVDSSVGGKTGINHPLGKNMLGAFQQPQVVLADMAQLNTLPERELSAGLAEVIKYALLGDEDFLVWLEE--NMDGLVARDADLLAEAVYRSCAHKARIVANDEK---ERALLNLGHTFGHAIESYLGYGTWLHGEAVATGMVMAADLSQRLGWISNE-DVARTKKIIQRANLPISC-PQIPLDDFLGYMAHDKKV---QLRLVLLKQLGQ------------------------


General information:
TITO was launched using:
RESULT:

Template: 5EKS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1752 -41541 -23.71 -129.01
target 2D structure prediction score : 0.57
Monomeric hydrophicity matching model chain A : 0.77

3D Compatibility (PKB) : -23.71
2D Compatibility (Sec. Struct. Predict.) : 0.57
1D Compatibility (Hydrophobicity) : 0.77
QMean score : 0.526

(partial model without unconserved sides chains):
PDB file : Tito_5EKS.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5EKS-query.scw
PDB file : Tito_Scwrl_5EKS.pdb: