Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNVLQTTNLSKTYYSNKGTISYQALSAFDLSVSKGEFVGIMGPSGSGKTTLLNLLATIDKPTQGEMMINGIQPKTLKDQELALFRRRELGFVFQDFNLLDTLTIRENILLPLALDKVKLREMEARLDELADTLQIKHILDHRTYEVSGGQQQRAACARAIIHNPALILADEPTGNLDSKSAKQVMNTLAQLNEEKEATILLVTHDATAAS-FCKRIVFIKDGRFFSEIHRGTNRQVFYQSILDTLSVLGGDFHEFENYRP
3DHW Chain:C ((1-229))--MIKLSNITKVFH--QGTRTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTEGSVLVDGQELTTLSESELT-KARRQIGMIFQHFNLLSSRTVFGNVALPLELDNTPKDEVKRRVTELLSLVGLGDKHDSYPSNLSGGQKQRVAIARALASNPKVLLCDEATSALDPATTRSILELLKDINRRLGLTILLITHEMDVVKRICDCVAVISNGEL---IEQDTVSEVF-----------------------


General information:
TITO was launched using:
RESULT:

Template: 3DHW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 1185 -148993 -125.73 -653.48
target 2D structure prediction score : 0.57
Monomeric hydrophicity matching model chain C : 0.79

3D Compatibility (PKB) : -125.73
2D Compatibility (Sec. Struct. Predict.) : 0.57
1D Compatibility (Hydrophobicity) : 0.79
QMean score : 0.532

(partial model without unconserved sides chains):
PDB file : Tito_3DHW.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3DHW-query.scw
PDB file : Tito_Scwrl_3DHW.pdb: