Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKVRKAIIPAAGLGTRFLPATKAMPKEMLPIVDKPTIQYIIEEAVEAGIEDIIIVTGKSKRAIEDHFDYSPELERNLEEKGKTELLEKVKKASNLADIHYIRQKEPKGLGHAVWCARNFIGDEPFAVLLGDDIVQAETPGLRQLMD-EYEKTLSSIIGVQQVPEEETHRYGIIDPLTSEGRRYQVKNFVEKP--PKGTAPSNLAILGRYVFTPEIFMYLEEQQVGAGGEIQLTDAIQKLNEIQRVFAYDFEGKRYDVGEKLGFITTTLEFAMQDKELRDQLVPFMEGLLNKEEI
1H5S Chain:A ((2-202))--KMRKGIILAGGSGTRLYPVTMAVSKQLLPIYDKPMIYYPLSTLMLAGIRDILIISTPQD---------TPRFQQLLGDGSQWGL-----------NLQYKVQPSPDGLAQAFIIGEEFIGGDDCALVLGDNIFYGHD--LPKLMEAAVNKESGATVFAYHVNDPE--RYGVVE-FDKNGTAISLE---EKPLEPK----SNYAVTGLYFYDNDVVLMAKNLKPSARGELEITD------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1H5S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 925 -70452 -76.16 -355.82
target 2D structure prediction score : 0.53
Monomeric hydrophicity matching model chain A : 0.74

3D Compatibility (PKB) : -76.16
2D Compatibility (Sec. Struct. Predict.) : 0.53
1D Compatibility (Hydrophobicity) : 0.74
QMean score : 0.400

(partial model without unconserved sides chains):
PDB file : Tito_1H5S.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1H5S-query.scw
PDB file : Tito_Scwrl_1H5S.pdb: