Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMYIMKQSGWLELICGSMFSGKSEELIRRVKRATYAKQEVRVFKPVIDNRYSEAAVVSHNGTSMTSYAISSAADIWDHISESTDVVAVDEVQFFDQEIVEVLSSLADKGYRVIAAGLDMDFRGEPFGVVPNIMAIAESVTKLQAVCSVCGS-PASRTQRLIDGKPASYDDPVILVGAAESYEARCRHHHEVPGKSKK
2QQ0 Chain:A ((2-174))------SGKLTVITGPMYSGKTTELLSFVEIYKLGKKKVAVFKPK-------TMIVSH----VEAHVIERPEEMRKYIEEDTRGVFIDEVQFFNPSLFEVVKDLLDRGIDVFCAGLDLTHKQNPFETTALLLSLADTVIKKKAVCHRCGEYNATLTLKVAGGEEE------IDVGGQEKYIAVCR-----------


General information:
TITO was launched using:
RESULT:

Template: 2QQ0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 841 -111240 -132.27 -690.93
target 2D structure prediction score : 0.46
Monomeric hydrophicity matching model chain A : 0.75

3D Compatibility (PKB) : -132.27
2D Compatibility (Sec. Struct. Predict.) : 0.46
1D Compatibility (Hydrophobicity) : 0.75
QMean score : 0.372

(partial model without unconserved sides chains):
PDB file : Tito_2QQ0.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2QQ0-query.scw
PDB file : Tito_Scwrl_2QQ0.pdb: