Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRKYEVMYIIRPNIDEESKKAVIERFNNVLTSNGAEITGTKDWGKRRLAYEINDFRDGFYQIVNVQSDAAAVQ-EFDRLAKISDDIIR--HIVVKEEE
2J5A Chain:A ((7-104))LRYYETVFAVKPTLSEEEMKKKFEQVKEFIKQKGGEILYEEDWGMRQLAYPIQKFNNARYFLVQFKTENPQLPNELDFQLKIDEDVIRWLNIQIKESE


General information:
TITO was launched using:
RESULT:

Template: 2J5A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 385 -22552 -58.58 -237.38
target 2D structure prediction score : 0.53
Monomeric hydrophicity matching model chain A : 0.80

3D Compatibility (PKB) : -58.58
2D Compatibility (Sec. Struct. Predict.) : 0.53
1D Compatibility (Hydrophobicity) : 0.80
QMean score : 0.617

(partial model without unconserved sides chains):
PDB file : Tito_2J5A.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2J5A-query.scw
PDB file : Tito_Scwrl_2J5A.pdb: