Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQQTAWAPRTSGIAGCGAGGVVMAIASVTLVTDTPGRVLTGVAALGLILFAS--ATWRARPRLAITPDGLAIRGWFRTQLLRHSNIKII-----RIDEFRRYGRLVRLLEIETVSGGLLILSRWDLGTDPVEVLDALTAAGYAGRGQR
3IEF Chain:A ((51-150))
------------------------------VDDTPAGGGAGMVMRADVLAAALDSCPNDSPRLLMSPRGRLLNQAYARSLARSSGVTLVCGRFEGVDE-----RIIEARELEEVSIGDYILSGGE--TAALVLLDAI-----------
General information:
TITO was launched using:
RESULT:
Template:
3IEF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -47910 for 580 contacts (-82.6/contact) +
2D Compatibility (PS) -9586 + (NN) 1845 + (LL) 2728
1D Compatibility (HY) -4400 + (ID) 1500
Total energy: -58823.0 ( -101.42 by residue)
QMean score : 0.129
(partial model without unconserved sides chains):
PDB file :
Tito_3IEF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3IEF-query.scw
PDB file :
Tito_Scwrl_3IEF.pdb
: