Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRILVVDNYDSFVFNLVQYLGQLGIEAEVWRNDDHRLSDEAAVAGQFDGVLLSPG-PGTPERAGASVSIVHACAAAHTPLLGVCLGHQAIGVAFGATVDRAPELLHGKTS-SVFHTNVGVLQGLPDPFTATRYHSLTILPKSLPAVLRVTARTSSGVIMAVQHTGLPIHGVQFHPESILTEGGHRILANWLTCCGWTQDDTLVRRLENEVLTAISPHFPTSTASAGEATGRTSA
2A9V Chain:A ((14-199))
LKIYVVDNGGQWTHREWRVLRELGVDTKIVPND----IDSSELDG-LDGLVLSGGAPNIDEELDKLGSVGKYIDDHNYPILGICVGAQFIALHFGASVVKAKHPEFGKTKVSVMHSE-NIFGGLPSEITVWENHNDEII--NLPDDFTLAASSATCQVQGFYHKTRPIYATQFHPEVEHTQYGRDIFRNFIGIC----------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2A9V.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -136452 for 1584 contacts (-86.1/contact) +
2D Compatibility (PS) -19460 + (NN) -4001 + (LL) 2604
1D Compatibility (HY) -13200 + (ID) 3000
Total energy: -173509.0 ( -109.54 by residue)
QMean score : 0.424
(partial model without unconserved sides chains):
PDB file :
Tito_2A9V.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2A9V-query.scw
PDB file :
Tito_Scwrl_2A9V.pdb
: