Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVLSTAFSQMFGIDYPIVSAPMDLIAGGELAAAVSGAGGLGLIG----------------GGYGDR-----------------------DWLARQF-DLAAGAPVGCGFITWSLARQPQLLDLALQYEPVAVMLSFGDPAV-FADAIKSAGTRLVCQIQNRTQAERALQVGADVLVAQGTEAGG--------HGHGPRSTLTLVPEIVDLVTARGTDIPVIAAGGIADGRGLAAALMLGAAGVLVGTRFYATVEALSTPQARDPLLAATGDDMCRTTIYDQLRRYPWPQGHTMSVLSNALTDQFEDTELDILHREEAMARYWRAVAARDYSIANVTAGQAAGLVNAVLPAADVITGMAQQAARTLTAMRAV |
| 4QIT Chain:A ((7-274)) | --MTDRFTRLLGIQQPIIQAPMLGVSTPALAAAVSNAGGLGSIAITGSAAEKGRALIREVRGLTDKPFNVNLFCHRPGQADPARERAWLDYLKPLFAEFGAEPPVRLKNIYLSFLEDPTLLPMLLEERPAAVSFHFGAPPRDQVRALQAVGIRVLVCATTPEEAALVEAAGADAVVAQGIEAGGSRGVFEPERGDAAIGTLALV----RLLAARGS-LPVVAAGGIMDGRGIRAALELGASAVQMGTAFVLCPESSANAAYREAL---KGPRAARTAL--------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4QIT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -151074 for 1659 contacts (-91.1/contact) +
2D Compatibility (PS) -23623 + (NN) -12662 + (LL) 9248
1D Compatibility (HY) -14000 + (ID) 4550
Total energy: -196661.0 ( -118.54 by residue)
QMean score : 0.401
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