Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNYSEVELLSRAHQLFAGDSRRPGLDAGTTPYGDLLSRAADLNVGAGQRRYQLAVDHSRAALLSAARTDAAAGAVITGAQRDRAWARRSTGTVLDEARSDTTVTAVMPIAQREAIRRRVARLRAQRAHVLTAR-RRARRHLAALRALRYRVAHGPGVALAKLRLPSPSGR--AGIAVHAALSRLGRPYVWG---ATGPNQ----------FDCSGLVQWAYAQAGVHLDRTTYQQINEGIPVPRSQVRPGDLVFPHPG---HVQLAIGNNLVVEAPHAGASVRVSSLGNNVQIRRPLSGR
4Q4G Chain:X ((1023-1195))
-----------------------------------------------------------------------------------------------------------------AVVNQVLGISATSAQVTANMGRKFLEQLGILQPTDTGITNAP-AGSAQGRIPRVYGRQASEYVIRRGMSQIGVPYSWGGGNAAGPSKGIDSGAGTVGFDASGLVLYSFAGVGIKLPHYSGSQYNLGRKIPSSQMRRGDVIFYGPNGSQHVTIYLGNGQMLEAPDVGLKVRVAPV-------------
General information:
TITO was launched using:
RESULT:
Template:
4Q4G.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -58513 for 1089 contacts (-53.7/contact) +
2D Compatibility (PS) -16102 + (NN) -4937 + (LL) 7776
1D Compatibility (HY) -9600 + (ID) 2700
Total energy: -84076.0 ( -77.20 by residue)
QMean score : 0.406
(partial model without unconserved sides chains):
PDB file :
Tito_4Q4G.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4Q4G-query.scw
PDB file :
Tito_Scwrl_4Q4G.pdb
: