Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAIFGRWSARQRLRRATRESLTIPTFSSSLDCTTRVIGGLWPAELSSNTAETATLAEHLKADLHRIVGSANDELMVIWRAGMADSTRRAEEDRVIDRARASAMRRVESAMRELRQITGRVPVEIPRMRGAGGSDLDTTRLMPAVTVVQPADQACTDWPVAAAEDDEARLQRLLAFVARQEPRLN------WAVGVHADGTTVLVTDVAHGWIPPGIALPEGVRLLAPARRAGRAP-ELVGIT-TCCKTYTPGDSLRRAVDSTAPTSSVQPRALPAIAGLSVELGIATQRHDGLPKIVHAMATAAGNGAAAEEVDLLRVHVDTALHHVLAQYPRVDPALLLNCMLLAATERSVTGDPIAANYHFAWFRELDSRR |
| 3TL2 Chain:A ((156-283)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------DTARFRTFIA----QELNLSVKDITGFVLGGHGDDMVPLVRYSYAGGIPLETLIPKE-RLEAIVERTRKGGGEIVGLLGNGSAYYAPAASL---VEMTEAILKDQRRVLPAIAYLEGEYGY-SDLYLGVPVIL------GGNG------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TL2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -6110 for 738 contacts (-8.3/contact) +
2D Compatibility (PS) -12607 + (NN) 100 + (LL) 20300
1D Compatibility (HY) -6000 + (ID) 2250
Total energy: -6567.0 ( -8.90 by residue)
QMean score : -0.017
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