Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKEAINATIQRILRTDRGITANQV-----LVDDLGFDSLKLFQLITELEDEFDIAISFRDAQNIKTVGDVYTSVAVWFPETAKPAPLGKGTA
2N50 Chain:A ((3-69))
-REEVLQKVAKIISNHFDIEADQVTDQLNIKDDLNADSISVMEFVLELEDEFGTEISDEDAEKIETVG------------------------
General information:
TITO was launched using:
RESULT:
Template:
2N50.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -28767 for 346 contacts (-83.1/contact) +
2D Compatibility (PS) -6750 + (NN) -2613 + (LL) 1436
1D Compatibility (HY) -5600 + (ID) 1250
Total energy: -43544.0 ( -125.85 by residue)
QMean score : 0.753
(partial model without unconserved sides chains):
PDB file :
Tito_2N50.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2N50-query.scw
PDB file :
Tito_Scwrl_2N50.pdb
: