Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIQIARTWRVFAGGMATGFIGVVLVTAGKASADPLLPPPPIPAPVSAPATVPPVQNLTALPGGSSNRFSPAPAPAPIASPIPVGAPGSTAVPPLPPPVTPAISGTLRDHLREKGVKLEAQRPHGFKALDITLPMPPRWTQVPDPNVPDAFVVIADRLGNSVYTSNAQLVVYRLIGDFDPAEAITHGYIDSQ-KLLAWQTTNASMANFDGFPSSIIEGTYRENDMTLNTSRRHVIATSGADKYLVSLSVTTALSQAVTDGPATDAIVNGFQVVAHAAPAQAPAPAPGSAPVGLPGQAPGYPPAGTLTPVPPR |
1TU1 Chain:A ((7-144)) | -----------------------------------------------------------------------------------------------------------------------------RLHEADLEIPDAWQDQS-------INIFKLPASGPAREASFVISRDASQGDAPFADYVARQLENAEKQLPGFKLHKRWDINIHGHAAVLLDYQWQREGRDLMLRQV--FIERRPAVLI--TTLTTTPADLPHHEPAWKQAMQTLVPRPT------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1TU1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -22181 for 864 contacts (-25.7/contact) +
2D Compatibility (PS) -14468 + (NN) -1356 + (LL) 4804
1D Compatibility (HY) 800 + (ID) 700
Total energy: -33101.0 ( -38.31 by residue)
QMean score : 0.200
|
|
|