Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPSFDVVFVGHRRGEVRSDNAMLGLLCDAAFDELTRPDVVIF-PGGI-GTRTLIHDQTVLDWVREAHRHTLLTTSVCTGGLVLAAAGLLNGLTATTHWRVQDLFNSLGARYVPQRVVEHLPERVITAAGVSSGIDMGLRLVELLVSREAAEASQLMIEYDPQPPVDAGSLAKASPATHRLALEFYQHRL
3EWN Chain:A ((65-225))
-----------------TSDAGLAIVPTATFGTCPRDLTVLFAPGGTDGTLAAASDAETLAFMADRGARAKYITSVCSGSLILGAAGLLKGYKATSHWSCRDALAGFGAIPTEARVVRD--RNRITGAGVTAGLDFGLSMVAELRDQTYAECAQLMSEYDPDPPFNAGS-MKTAPAHVRTA--------
General information:
TITO was launched using:
RESULT:
Template:
3EWN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -78883 for 1160 contacts (-68.0/contact) +
2D Compatibility (PS) -17103 + (NN) -8374 + (LL) 2256
1D Compatibility (HY) -8800 + (ID) 3350
Total energy: -114254.0 ( -98.49 by residue)
QMean score : 0.385
(partial model without unconserved sides chains):
PDB file :
Tito_3EWN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3EWN-query.scw
PDB file :
Tito_Scwrl_3EWN.pdb
: