Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGDLSISQVSARPGRIGIRARQMFDGYRFQRGPVL----VVVEDGRISAVDFAGSACPDMNLVDLGESTLLPGLVDAHAHLCWDPDGRPEDLAGDPHAVLVGRARRHAAAALRSGITTIRDLGDRDYAALALREEYRQKTTVGPELVVSGPPLTRSGGH-----------CWFLGG----VADSVEELVDAVQERAARGADWIKVMATGGFVTTASDPW-QPQYGSGQLAAVVAAAEQVGLPVTAHAHATAGIAAAVAAGVDGIEHCTFLSEGSAA--------ASPDVV--EAIVAQGVWCGMTIPRVYPEMPENLVAVVQDGWRNIRRLIDAGARVALSTDAGVAPGRRHDVLPDDLVYLSRHGFTSTEVLTGATAAAAASCGLGHRKGRIAPGYDADLLAVAAGVDHDPAGLCD----VKAVWRSGTQVPLQASAVGYNTPS |
| 3FEQ Chain:A ((16-411)) | ----------------------------LERGVLLEHHHVVIDGERIVEVTDRPVDLPNAQAIDVRGKTVMPGFIDCHVHVLASNANLGVN-ATQPNILAAIRSLPILDAMLSRGFTSVRDAGGADWS---LMQAVETGLVSGPRIFPSGKALSQTGGHGDFRPRLEPCSCCFRTGAIARVVDGVEGVRLAVREEIQKGATQIKIMASGG-VASPTDPIANTQYSEDEIRAIVDEAEAANTYVMAHAYTGRAIARAVRCGVRTIEHGNLVDEAAAKLMHEHGAFVVPTLVTYDALAKHGAEFGMP-----PESVAKVASVQQKGRESLEIYANAGVKMGFGSD---LLGEMHAFQSGEF-RIRAEVLGNLEALRSATTVAAEIVNMQGQLGVIAVGAIADLVVLDGNPLEDIGVVADEGARVEYVLQRGTLVKRQ---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3FEQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -118613 for 3134 contacts (-37.8/contact) +
2D Compatibility (PS) -39846 + (NN) -19305 + (LL) 3336
1D Compatibility (HY) -18800 + (ID) 5750
Total energy: -198978.0 ( -63.49 by residue)
QMean score : 0.454
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