Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSTIDISAGT-IHYEATGPETGRPVVFVHGYMMGGQLWRRVSERLAGRGLRCIAPTWPLGAHPKPLRPGADQTIGGVAGIVADVLAALELKDVVLVGNDT-GGVVTQLVAVHYPERLGALVLTSCDAFEHFPPPILK----PVILAAKSATLFRAAIQVMRAP----------AARNRAYAGLSHHNIDHLTRAWVRPALSNPAIAEDLRQLSLSLRTEVTTAVAARLPEFDKPALIAWSADDVFFALENGQRLAATIPRARFEVIEGARTFSMVDSPDRLADQLSTVAVRT |
| 1A88 Chain:A ((2-226)) | --TVTTSDGTNIFYKDWGPRDGLPVVFHHGWPLSADDWDNQMLFFLSHGYRVIAHD--RRGHGRSDQPSTGHDMDTYAADVAALTEALDLRGAVHIGHSTGGGEVARYVARAEPGRVAKAVLVSA-----VPPVMVKSDTNPDGLPLEVFDEFRAALAANRAQFYIDVPSGPFYGFNREGATVSQGLIDHW---WLQGMMG----AANAHYECIAAFSE--TDFTDDLKRIDVPVLVAHGTDD------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1A88.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -136056 for 1636 contacts (-83.2/contact) +
2D Compatibility (PS) -22334 + (NN) -9303 + (LL) 5372
1D Compatibility (HY) -7600 + (ID) 3500
Total energy: -173421.0 ( -106.00 by residue)
QMean score : 0.361
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