Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEIKRRTQEERSAATREALITGARKLWGLRGYAEVGTPEIATEAGVTRGAMYHQFADKAALFRDVVEVVEQDVMARMATLVAASGAATPADAIRAA-VDAWLEVSGDPEVRQL--ILL--DAP------VVLGWAGFRDVAQRYSLGMTEQLITEAIRAGQLARQPVRPLAQVLIGALDEAAMFIATADDPKRARRETRQVLRRLIDGMLNG
3P9T Chain:A ((6-174))
-------KED-TQATREGILDAAEACFHEHGVARTTLEMIGARAGYTRGAVYWHFKNKSEVLAAIVERVHLPFMQELER-TSTDQRDTPVHDLRAVMIHSFIELSEDERLRKTMEIMLRSDASANTRVLTEMQQAGFRDALDRMERALRRARDLGQLREGADPKIAARMLHATVLGVL----------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3P9T.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -60860 for 1093 contacts (-55.7/contact) +
2D Compatibility (PS) -17021 + (NN) -7535 + (LL) 3732
1D Compatibility (HY) -8400 + (ID) 2300
Total energy: -92384.0 ( -84.52 by residue)
QMean score : 0.330
(partial model without unconserved sides chains):
PDB file :
Tito_3P9T.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3P9T-query.scw
PDB file :
Tito_Scwrl_3P9T.pdb
: