Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSNSRRRSLRWSWLLSVLAAVGLGLATAPAQAAPPALSQDRFADFPALPLDPSAMVAQVGPQVVNINTKLGYNNAVGAGTGIVIDPNGVVLTNNHVIAGATDINAFSVGSGQTYGVDVVGYDRTQDVAVLQLRGAGGLPSAAIGGGVA--VGEPVVAMGNSGGQGGTPRAVPGRVVALGQTVQASDSLTGAEET-LNGLIQFDAAIQPGDSGGPVVNGLGQVVGMNTAASD--NFQLSQGGQGFAIPIGQAMAIAGQIRSGGGSPTVHIG-------PTAFLGLGVVDNNGNGARVQRVVGSAPAASLGISTGDVITAVDGAPINSATAMADALNGHHPGDVISVTWQTKSGGTRTGNVTLAEGPPA |
| 1TE0 Chain:A ((80-352)) | ------------------------------------------------------------------------------GSGVIMDQRGYIITNKHVINDADQI-IVALQDGRVFEALLVGSDSLTDLAVLIIKATGGLPTIPINARRVPHIGDVVLAIGNPYNLGQT----------ITQGIISATGRIGLNPTGRQNFLQTDASINHGNSGGALVNSLGELMGINTLSFDKSNDGETPEGIGFAIPFQLATKIMDKLIRDGRVIRGYIGIGGREIAPLHAQGGGI--DQLQGIVVNEVSPDGPAANAGIQVNDLIISVDNKPAISALETMDQVAEIRPGSVIPVVVM-RDDKQLTLQVTIQEYP-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1TE0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -101047 for 1957 contacts (-51.6/contact) +
2D Compatibility (PS) -28784 + (NN) -16529 + (LL) 5596
1D Compatibility (HY) -15200 + (ID) 4550
Total energy: -160514.0 ( -82.02 by residue)
QMean score : 0.340
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