Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSEVVTAAPAPPVVRLPPAVRGPKLFQGLAFVVSRRRLLGRFVRRYGKAFTANILMYGRVVVVADPQLARQVFTSSPEELGNIQ--PNLSRMFGSGSVFALDGDDHRRRRRLLAPPFHGKSMKNYETIIEEETLRETANWPQGQAFATLPSMMHITLNAILRAIFGAGG-SELDELRRLIPPWVTLGSRLAALPKPKRDYGRLSPWGRLAEWRRQYDTVIDKLIEAERADPNFADRTDVLALMLRSTYDDGSI-MSRKDIGDELLTLLAAGHETTAATLGWAFERLSRHPDVLAALVEEVDN--------GGHELRQAAILEVQRARTVIDFAARRVNPPVYQL-----GEWV-----IPRGYSIIINIAQIHGDPDVFPQPDRFDPQRYIGSKPSPF----AWIPFGGGTRRCVGAAFANMEMDVVLRTVLRHFTLETTTAAGERSHGRGVAFTPKDGGRVVMRRR |
| 2BZ9 Chain:A ((49-418)) | ----------------------------------------------------------QVVLLSGSHANEFFFRAGDDDLDQAKAYPFMTPIFG----------------MLHNAALRGEQMKGHAATIEDQVRRMIADWGEAGEIDLLDFFAELTIYTSSACLIGKKFRDQLDGRFAKLYHELERGTDPLAYVDP---YLPIESFRRRDEARNGLVALVADIMNGRIANP--SDR-DMLDVLIAVKAETGTPRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYGDGRSVSFHALRQIPQLENVLKETL------RLHPPLIILMRVAKGEFEVQGHRIHEGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQEDLLNRWTWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEFE----------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2BZ9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -147510 for 2476 contacts (-59.6/contact) +
2D Compatibility (PS) -35728 + (NN) -24441 + (LL) 6916
1D Compatibility (HY) -19600 + (ID) 4650
Total energy: -225013.0 ( -90.88 by residue)
QMean score : 0.475
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