Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAPKRSSDLFSQVVNSGPGSFLARQLGVPQPETLRRYRAGEPPLTGSLLIGGAGRVVEPLRAALEKDYDLVGNNLGGRWADSFGGLVFDATGITEPAGLKGLHEFFTPVLRNLGRCGRVVVVGGTPEAAASTNERIAQRALEGFTRSLGKELRRGATTALVYLSPDAKPAATGLESTMRFLLSAKSAYVDGQVFSVGADDSTPPADWEKPLDGKVAIVTGAARGIGATIAEVFARDGAHVVAIDVESAAENLAETASKVGGTALWLDVTADDAVDKISEHLRDHHGGKADILVNNAGITRDKLLANMDDARWDAVLAVNLLAPLRLTEGLVGNGSIGEGGRVIGLSSIAGIAGNRGQTNYATTKAGMIGITQALAPGLAAKGITINAVAPGFIETQMTAAIPLATREVGRRLNSLLQGGQPVDVAEAIAYFASPASNAVTGNVIRVCGQAMIGA |
3U0B Chain:A ((30-454)) | -----------------------------QPETLRRYRPGDPPLAGSLLIGGSGRVAEPLRTALADDYNLVSNNIGGRWADSFGGVVFDATGITEAEGLKELYTFFTPLLRNLAPCARVVVVGTTPAEAGSVHAQVVQRALEGFTRSLGKELRRGATVSLVYLSADAKPGATGLESTMRFILSAKSAYVDGQVFRVGAADSTPPADWDKPLDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAAEDLKRVADKVGGTALTLDVTADDAVDKITAHVTEHHGGKVDILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIAGNRGQTNYATTKAGMIGLAEALAPVLADKGITINAVAPGFIET----------REVGRRLNSLFQGGQPVDVAELIAYFASPASNAVTGNTIRVCGQAMLGA |
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General information:
TITO was launched using:
| RESULT:
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Template: 3U0B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -239558 for 3799 contacts (-63.1/contact) +
2D Compatibility (PS) -44288 + (NN) -20467 + (LL) 2240
1D Compatibility (HY) -46000 + (ID) 17250
Total energy: -365323.0 ( -96.16 by residue)
QMean score : 0.603
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