Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MMTLKVAIGPQNAFVLRQGIRREYVLVIVALCGIADGALIAAGVGGFAALIHAHPNMTLVARFGGAAFLIGYALLAARNAWRPSGLVPSESGPAALIGVVQMCLVVTFLNPHVYLDTVVLIGALANEESDLRWFFGAGAWAASVVWFAVLGFSAGRLQPFFATPAAWRILDALVAVTMIGVAVVVLVTSPSVPTANVALII |
2MIC Chain:A ((21-37)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VVGLVAYIAFKRWNSSK------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2MIC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -3644 for 62 contacts (-58.8/contact) +
2D Compatibility (PS) -1670 + (NN) -1550 + (LL) 16012
1D Compatibility (HY) -1200 + (ID) 50
Total energy: 7898.0 ( 127.39 by residue)
QMean score : 0.100
|
|
|