Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHNNGRMLGVIGGSGFYTFFGSDTRTVN-SDTPYGQPSAPITIGTIGVHDVAFLPRHGAHHQYSAHAVPYRANMWALRALGVRRVFGPCAVGSLDPELEPGAVVVPDQLVDRTSGRADTYFD------FGGVHAAFADPYCPTLRAAVTGLPGVV-----DGGTMVVIQGPRFSTRAESQWFAAAGCNLVNMTGYPEAVLARELELCYAAIALVTDVDAGVAAGDGVKAADVFAAFGENIELLKRLVRAAIDRVADERTCTHCQHHAGVPLPFELP
1CB0 Chain:A ((12-258))
-------IGIIGGTGLDDPEILEGRTEKYVDTPFGKPSDALILGKIKNVDCVLLARHGRQHTIMPSKVNYQANIWALKEEGCTHVIVTTACGSLREEIQPGDIVIIDQFIDRTTMRPQSFYDGSHSCARGVCHIPMAEPFCPKTREVLIETAKKLGLRCHSKGTMVTIEGPRFSSRAESFMFRTWGADVINMTTVPEVVLAKEAGICYASIAMATDYDCW-----AVSVDRVLKTLKENANKAKSLLLTTIPQI----------------------
General information:
TITO was launched using:
RESULT:
Template:
1CB0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -164260 for 1946 contacts (-84.4/contact) +
2D Compatibility (PS) -24939 + (NN) -11783 + (LL) 1532
1D Compatibility (HY) -17600 + (ID) 4600
Total energy: -221650.0 ( -113.90 by residue)
QMean score : 0.518
(partial model without unconserved sides chains):
PDB file :
Tito_1CB0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1CB0-query.scw
PDB file :
Tito_Scwrl_1CB0.pdb
: