Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSDPVSYTRKDSIAVISMDDGKVNALGPAMQQALNAAIDNADRDDVGALVITGNGRVFSGGFDLKILTSGEVQPAIDMLRGGFELAYRLLSYPKPVVMACTGHAIAMGAFLLSCGDHRVAAHAYNIQANEVAIGMTIPYAALEIMKLRLTRSAYQQATGLAKTFFGETALAAGFIDEIALPEVVVSRAEEAAREFAGLNQHAHAATKLRSRADALTAIRAGIDGIAAEFGL
3R6H Chain:A ((5-232))
--GPVTYTHDDAIGVIRMDDGKVNVLGPTMQQALNEAIDAADRDNVGALVIAGNHRVFSGGFDLKVLT---AKPAIDMLRGGFELSYRLLSYPKPVVIACTGHAIAMGAFLLCSGDHRVAAHAYNVQANEVAIGMTIPYAAMEVLKLRLTPSAYQQAAGLAKTFFGETALAAGFIDEISLPEVVLSRAEEAAREFAGLNQQAHNATKLRARAEALKAIRAGIDGIEAEFG-
General information:
TITO was launched using:
RESULT:
Template:
3R6H.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -184581 for 1993 contacts (-92.6/contact) +
2D Compatibility (PS) -25117 + (NN) -11379 + (LL) 260
1D Compatibility (HY) -28000 + (ID) 9500
Total energy: -258317.0 ( -129.61 by residue)
QMean score : 0.620
(partial model without unconserved sides chains):
PDB file :
Tito_3R6H.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3R6H-query.scw
PDB file :
Tito_Scwrl_3R6H.pdb
: