Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTTFDGDTSAGEAVDLTEANAFQDAAAPAEEVDPAAALKAELRSKPGDWYVVHSYAGYENKVKANLETRVQNLDVGDYIFQVEVPTEEVTEIKNGQRKQVNRKVLPGYILVRMDLTDDSWAAVRNTPGVTGFVGATSRPSALALDDVVKFLLPRGSTRKAAKGAASTAAAAEAGGLERPVVEVDYEVGESVTVMDGPFATLPATISEVNAEQQKLKVLVSIFGRETPVELTFGQVSKI |
| 2XHC Chain:A ((225-352)) | -------------------------------------------------------------------------------------------------KTKRRKLFPGYVFVEMIMNDEAYNFVRSVPYVMGFVSSGGQPVPVKDREMRPIL--------------RLAGLEEY--------ELGFKVGDMVKIISGPFEDFAGVIKEIDPERQELKVNVTIFGRETPVVLHVSEVEKI |
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General information:
TITO was launched using:
| RESULT:
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Template: 2XHC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -57753 for 712 contacts (-81.1/contact) +
2D Compatibility (PS) -12738 + (NN) -3185 + (LL) 7220
1D Compatibility (HY) -13200 + (ID) 2350
Total energy: -82006.0 ( -115.18 by residue)
QMean score : 0.452
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