Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSDLVRVERKGRVTTVILNRPASRNAVNGPTAAALCAAFEQFDRDDAASVAVLWGAGGTFCAGADLKAFGTPEANSVHRTGPGPMGPSRMM---LSKPVIAAVSGYAVAGGLELALWCDLRVAEEDAVFGVFCRRWGVPLIDGGTVRLPRLIGHSRAMDMILTGRGVPADEALAMGLANRVVPKGQARQAAEELAAQLAALPQQCLRSDRLSALHQWGLPESAALDLEFASIARVAGEALEGARRFAAGAGRHGAPAPRAEQGDTL
3RSI Chain:A ((13-204))
------VERDGPVVILTMNRPHRRNALSTNMVSQFAAAWDEIDHDDGIRAAILTGAGSAYCVGG--------------PLDPATIGKGLLLSHTLTKPLIAAVNGACLGGGCEMLQQTDIRVSDEHATFGLPEVQRGLVPGAGSMVRLKRQIPYTKAMEMILTGEPLTAFEAYHFGLVGHVVPAGTALDKARSLADRI--------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3RSI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -131285 for 1494 contacts (-87.9/contact) +
2D Compatibility (PS) -18933 + (NN) -2550 + (LL) 5624
1D Compatibility (HY) -10800 + (ID) 3500
Total energy: -161444.0 ( -108.06 by residue)
QMean score : 0.541
(partial model without unconserved sides chains):
PDB file :
Tito_3RSI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3RSI-query.scw
PDB file :
Tito_Scwrl_3RSI.pdb
: