Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTSPVAVIARFMPRPDARSALRALLDAMITPTRAEDGCRSYDLYESADGGELVLF-ERYRSRIALDEHRGSPHYLNYRAQVGELLTRPVAVTVLAPLDEASA
2BBE Chain:A ((14-90))
----IVCVASFLSKEGKTEALIAALASLIPDTRREAGCIRYELNVSRDEPRRVTFVEKFVDIAAFDEHCAKDAIQHYFHQV---------------------
General information:
TITO was launched using:
RESULT:
Template:
2BBE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -26294 for 478 contacts (-55.0/contact) +
2D Compatibility (PS) -8338 + (NN) -6288 + (LL) 1804
1D Compatibility (HY) -5200 + (ID) 1300
Total energy: -45616.0 ( -95.43 by residue)
QMean score : 0.423
(partial model without unconserved sides chains):
PDB file :
Tito_2BBE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2BBE-query.scw
PDB file :
Tito_Scwrl_2BBE.pdb
: