Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MADQLTPHLEIPTAIKPRDGRFGSGPSKVRLEQLQTLTTTAAALFGTSHRQAPVKNLVGRVRSGLAELFSLPDGYEVILGNGGATAFWDAAAFGLIDK--RSLHLTYGEFSAKFASAVSKNPFVGEPIIITSDPGSAPEPQ-------TDPSVDVIAWAHNETSTGVAVAVRRPE-----GSDDALVVIDATSGAGGLPVDIAE--TDAYYFAPQKNFASDGGLWLAIMSPAALSRIEAIAATGRWVPDFLSLPIAVEN-SLKNQTYNTPAIATLALLAEQIDWLVGNGGLDWAVKRTADSSQRLYSWAQERPYTTPFVTDPGLRSQVVGTIDFVDDVDAGTVAKILRANGIVDTEPYRKLGRNQLRVAMFPAVEPDDVSALTECVDWVVERL |
| 2DR1 Chain:A ((12-379)) | ---------EVYEMVKPKYKLFTAGPVACFPEVLEIMKVQ---MF--SHRSKEYRKVHMDTVERLREFLEVEKG-EVLLVPSSGTGIMEASIRNGVSKGGKVLVTIIGAFGKRYKEVVESNG--RKAVVLEYEPGKAVKPEDLDDALRKNPDVEAVTITYNETSTGVLNPL--PELAKVAKEHDKLVFVDAVSAMGGADIKFDKWGLDVVFSSSQKAFGVPPGLAIGAFSERFLEIAEKMPERG-W---YFDIPLYVKYLKEKESTPSTPPMPQVFGINVALRIIEKMGGKEKWLEMYEKRAKMVREGVRE--IGLDILAEPGHESPTITAVLTPPGIKGDEVYEAMRKRGFELAKGYGSVKEKTFRIGHMGYMKFEDIQEMLDNLREVINEL |
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General information:
TITO was launched using:
| RESULT:
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Template: 2DR1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -162767 for 3091 contacts (-52.7/contact) +
2D Compatibility (PS) -38441 + (NN) -24644 + (LL) 1668
1D Compatibility (HY) -20800 + (ID) 4000
Total energy: -248984.0 ( -80.55 by residue)
QMean score : 0.530
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