Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSKELTAKKRAALNRLKTVRGHLDGIVRMLESDAYCV--DVMKQISAVQSSLERANRVMLHNHLETCFSTAVLDGHGQAAIEELIDAVKFTPALTGPHARLGGAAVGESATEEPMPDASNM
3ZGC Chain:A ((167-250))
----------AVLNRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVLHNCI---YAAGGYDGQDQLNSVERYDVATATWTFVAP------------------------
General information:
TITO was launched using:
RESULT:
Template:
3ZGC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -10249 for 556 contacts (-18.4/contact) +
2D Compatibility (PS) -8311 + (NN) 5295 + (LL) 2164
1D Compatibility (HY) -2000 + (ID) 1150
Total energy: -14251.0 ( -25.63 by residue)
QMean score : -0.069
(partial model without unconserved sides chains):
PDB file :
Tito_3ZGC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ZGC-query.scw
PDB file :
Tito_Scwrl_3ZGC.pdb
: