Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLKGFKEFLARGNIVDLAVAVVIGTAFTALVTKFTDSIITPLINRIGVNAQSDVGILRIGIGGGQTIDLNVLLSAAINFFLIAFAVYFLVVLPYNTLRKKGEVEQPGDTQVVLLTEIRDLLAQTNGDSPGRHGGRGTPSPTDGPRASTESQ
3LFG Chain:A ((22-64))
--------------------------FVQTASKFSSQIWVEKDNK-KVNAKSIMGIMSLGVSQGNVVKLS---------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3LFG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -18299 for 240 contacts (-76.2/contact) +
2D Compatibility (PS) -4568 + (NN) -1449 + (LL) 6992
1D Compatibility (HY) -3200 + (ID) 700
Total energy: -21224.0 ( -88.43 by residue)
QMean score : 0.248
(partial model without unconserved sides chains):
PDB file :
Tito_3LFG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3LFG-query.scw
PDB file :
Tito_Scwrl_3LFG.pdb
: